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[automated] update transfemscience

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github-actions 2026-02-14 02:11:37 +00:00
parent d05a8e3892
commit 9008262152
6 changed files with 97 additions and 87 deletions
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2
transfemscience.org/articles/aqueous-suspensions/index.html
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transfemscience.org/articles/injectable-e2-meta-analysis/index.html
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transfemscience.org/articles/transfem-intro/index.html
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transfemscience.org/assets/js/hover-refs.js
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@ -125,8 +125,82 @@
const isInReferenceList = referenceLists.some(list => list.contains(link));
if (isInReferenceList) return;
// We only care if the link HAS an href and it's in our map
// We only care if the link HAS an href
if (rawHref && !rawHref.startsWith('#')) {
// FIRST: Check if this link should show a hover box based on parentheses
// Check if the link itself contains parentheses with a year (e.g. "(2005)" or "(2005a)" or "(Aly, 2020)")
// We allow other text inside the parens, but it MUST contain a year-like number.
const yearParensRegex = /\([^)]*\b\d{4}[a-z]?\b[^)]*\)/i;
const textHasParens = link.textContent.includes('(') || link.textContent.includes(')');
const textMatchingParensYear = yearParensRegex.test(link.textContent);
// Check if enclosed in parentheses by walking siblings
let isEnclosed = false;
// We only scan if:
// 1. The text itself doesn't contain matching parens (if it does, we already know if it's valid or not)
// OR
// 2. The text doesn't contain parens at all (so we look for surrounding ones)
if (!textMatchingParensYear && !textHasParens) {
// If text has parens but didn't match yearParensRegex, it's invalid (e.g. "Kuhl (Citation)")
// So we only scan if text does NOT have parens.
let openParenCount = 0;
let foundOpen = false;
let curr = link.previousSibling;
let scans = 0;
const MAX_SCANS = 100; // Reasonable lookbehind limit
while (curr && scans < MAX_SCANS) {
if (curr.nodeType === 3) { // Text node
const txt = curr.textContent;
// Count parens from right to left
for (let i = txt.length - 1; i >= 0; i--) {
const c = txt[i];
if (c === ')') openParenCount--;
else if (c === '(') openParenCount++;
if (openParenCount > 0) {
foundOpen = true;
break;
}
}
} else if (curr.nodeType === 1) { // Element node
const tagName = curr.tagName;
// Stop at block boundaries
if (/^(DIV|P|BODY|MAIN|SECTION|BLOCKQUOTE|UL|OL|LI|TABLE|BR|HR|H[1-6])$/.test(tagName)) {
break;
}
// Check text content of inline elements
const txt = curr.textContent;
for (let i = txt.length - 1; i >= 0; i--) {
const c = txt[i];
if (c === ')') openParenCount--;
else if (c === '(') openParenCount++;
if (openParenCount > 0) {
foundOpen = true;
break;
}
}
}
if (foundOpen) break;
curr = curr.previousSibling;
scans++;
}
if (foundOpen) {
isEnclosed = true;
}
}
// Only proceed if link has parentheses (in text or structurally enclosed)
if (!textMatchingParensYear && !isEnclosed) return;
// SECOND: Try to find matching reference in urlMap
const exactHref = normalizeRefUrl(rawHref);
const baseHref = exactHref.split('#')[0];
@ -135,91 +209,25 @@
bestMatchHTML = urlMap.get(baseHref);
}
// Fallback for unmatched links (e.g. Wiki links, or refs without date/year)
// User requested to show just the URL, but ONLY if it looks like a ref (in parentheses)
// THIRD: Fallback for unmatched links - show the URL itself
if (!bestMatchHTML) {
// Check if the link itself contains parentheses with a year (e.g. "(2005)" or "(2005a)" or "(Aly, 2020)")
// We allow other text inside the parens, but it MUST contain a year-like number.
const yearParensRegex = /\([^)]*\b\d{4}[a-z]?\b[^)]*\)/i;
const textHasParens = link.textContent.includes('(') || link.textContent.includes(')');
const textMatchingParensYear = yearParensRegex.test(link.textContent);
// Check if enclosed in parentheses or brackets by walking siblings
let isEnclosed = false;
// We only scan if:
// 1. The text itself doesn't contain matching parens (if it does, we already know if it's valid or not)
// OR
// 2. The text doesn't contain parens at all (so we look for surrounding ones)
if (!textMatchingParensYear && !textHasParens) {
// If text has parens but didn't match yearParensRegex, it's invalid (e.g. "Kuhl (Citation)")
// So we only scan if text does NOT have parens.
let openParenCount = 0;
let openBracketCount = 0;
let foundOpen = false;
let curr = link.previousSibling;
let scans = 0;
const MAX_SCANS = 100; // Reasonable lookbehind limit
while (curr && scans < MAX_SCANS) {
if (curr.nodeType === 3) { // Text node
const txt = curr.textContent;
// Count parens from right to left
for (let i = txt.length - 1; i >= 0; i--) {
const c = txt[i];
if (c === ')') openParenCount--;
else if (c === '(') openParenCount++;
else if (c === ']') openBracketCount--;
else if (c === '[') openBracketCount++;
if (openParenCount > 0 || openBracketCount > 0) {
foundOpen = true;
break;
}
}
} else if (curr.nodeType === 1) { // Element node
const tagName = curr.tagName;
// Stop at block boundaries
if (/^(DIV|P|BODY|MAIN|SECTION|BLOCKQUOTE|UL|OL|LI|TABLE|BR|HR|H[1-6])$/.test(tagName)) {
break;
}
// Check text content of inline elements
const txt = curr.textContent;
for (let i = txt.length - 1; i >= 0; i--) {
const c = txt[i];
if (c === ')') openParenCount--;
else if (c === '(') openParenCount++;
else if (c === ']') openBracketCount--;
else if (c === '[') openBracketCount++;
if (openParenCount > 0 || openBracketCount > 0) {
foundOpen = true;
break;
}
}
}
if (foundOpen) break;
curr = curr.previousSibling;
scans++;
}
if (foundOpen) {
isEnclosed = true;
}
// Exception: Skip if link text starts with lowercase (e.g. "(see here)" or "(more info)")
// These are likely general parenthetical links, not citations
const linkText = link.textContent.trim();
const firstChar = linkText.charAt(0);
if (firstChar && firstChar === firstChar.toLowerCase() && firstChar !== firstChar.toUpperCase()) {
return; // Skip lowercase-starting unmatched links
}
if (textMatchingParensYear || isEnclosed) {
let displayUrl = rawHref;
if (rawHref.startsWith('/')) {
displayUrl = 'https://transfemscience.org' + rawHref;
}
bestMatchHTML = `<div class="fallback-url-content"><a href="${rawHref}" target="_blank">${displayUrl}</a></div>`;
let displayUrl = rawHref;
if (rawHref.startsWith('/')) {
displayUrl = 'https://transfemscience.org' + rawHref;
}
bestMatchHTML = `<div class="fallback-url-content"><a href="${rawHref}" target="_blank">${displayUrl}</a></div>`;
}
if (bestMatchHTML) {
link.classList.add('reference-link');

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transfemscience.org/feed-posts.xml
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@ -1 +1 @@
<?xml version="1.0" encoding="utf-8"?><feed xmlns="http://www.w3.org/2005/Atom" ><generator uri="https://jekyllrb.com/" version="3.10.0">Jekyll</generator><link href="https://transfemscience.org/feed-posts.xml" rel="self" type="application/atom+xml" /><link href="https://transfemscience.org/" rel="alternate" type="text/html" /><updated>2026-02-06T16:23:17-08:00</updated><id>https://transfemscience.org/feed-posts.xml</id><title type="html">Transfeminine Science</title><subtitle>Transfeminine Science is a site for information on hormone therapy for transfeminine people.</subtitle><author><name>Transfeminine Science</name></author></feed>
<?xml version="1.0" encoding="utf-8"?><feed xmlns="http://www.w3.org/2005/Atom" ><generator uri="https://jekyllrb.com/" version="3.10.0">Jekyll</generator><link href="https://transfemscience.org/feed-posts.xml" rel="self" type="application/atom+xml" /><link href="https://transfemscience.org/" rel="alternate" type="text/html" /><updated>2026-02-09T15:58:58-08:00</updated><id>https://transfemscience.org/feed-posts.xml</id><title type="html">Transfeminine Science</title><subtitle>Transfeminine Science is a site for information on hormone therapy for transfeminine people.</subtitle><author><name>Transfeminine Science</name></author></feed>

6
transfemscience.org/feed.xml
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@ -1,4 +1,4 @@
<?xml version="1.0" encoding="utf-8"?><feed xmlns="http://www.w3.org/2005/Atom" ><generator uri="https://jekyllrb.com/" version="3.10.0">Jekyll</generator><link href="https://transfemscience.org/feed.xml" rel="self" type="application/atom+xml" /><link href="https://transfemscience.org/" rel="alternate" type="text/html" /><updated>2026-02-06T16:23:17-08:00</updated><id>https://transfemscience.org/feed.xml</id><title type="html">Transfeminine Science | Articles</title><subtitle>Transfeminine Science is a site for information on hormone therapy for transfeminine people.</subtitle><author><name>Transfeminine Science</name></author><entry><title type="html">A Review of Pharmaceutical Interventions for Scalp Hair Loss and Implications for Transfeminine People</title><link href="https://transfemscience.org/articles/hair-loss/" rel="alternate" type="text/html" title="A Review of Pharmaceutical Interventions for Scalp Hair Loss and Implications for Transfeminine People" /><published>2025-09-08T18:00:00-07:00</published><updated>2025-09-09T00:00:00-07:00</updated><id>https://transfemscience.org/articles/hair-loss</id><content type="html" xml:base="https://transfemscience.org/articles/hair-loss/"><![CDATA[<h1 id="a-review-of-pharmaceutical-interventions-for-scalp-hair-loss-and-implications-for-transfeminine-people">A Review of Pharmaceutical Interventions for Scalp Hair Loss and Implications for Transfeminine People</h1>
<?xml version="1.0" encoding="utf-8"?><feed xmlns="http://www.w3.org/2005/Atom" ><generator uri="https://jekyllrb.com/" version="3.10.0">Jekyll</generator><link href="https://transfemscience.org/feed.xml" rel="self" type="application/atom+xml" /><link href="https://transfemscience.org/" rel="alternate" type="text/html" /><updated>2026-02-09T15:58:58-08:00</updated><id>https://transfemscience.org/feed.xml</id><title type="html">Transfeminine Science | Articles</title><subtitle>Transfeminine Science is a site for information on hormone therapy for transfeminine people.</subtitle><author><name>Transfeminine Science</name></author><entry><title type="html">A Review of Pharmaceutical Interventions for Scalp Hair Loss and Implications for Transfeminine People</title><link href="https://transfemscience.org/articles/hair-loss/" rel="alternate" type="text/html" title="A Review of Pharmaceutical Interventions for Scalp Hair Loss and Implications for Transfeminine People" /><published>2025-09-08T18:00:00-07:00</published><updated>2025-09-09T00:00:00-07:00</updated><id>https://transfemscience.org/articles/hair-loss</id><content type="html" xml:base="https://transfemscience.org/articles/hair-loss/"><![CDATA[<h1 id="a-review-of-pharmaceutical-interventions-for-scalp-hair-loss-and-implications-for-transfeminine-people">A Review of Pharmaceutical Interventions for Scalp Hair Loss and Implications for Transfeminine People</h1>
<!-- Supports up to four authors per article currently (author, author2, author3, author4) -->
@ -2377,7 +2377,9 @@ Figure 5. Meta-analysis of estradiol concentration-time data from cisgender wome
<p>A letter to the editor commented on and concorded with Rothman and colleagues’ second literature review:</p>
<p>Patel, K. T., &amp; Tangpricha, V. (2024). Parenteral Estradiol for Transgender Women: Time to adjust the dose. <em>Endocrine Practice</em>, <em>30</em>(9), 893–894. [DOI:<a href="https://doi.org/10.1016/j.eprac.2024.07.005">10.1016/j.eprac.2024.07.005</a>]</p>
<ul>
<li>Patel, K. T., &amp; Tangpricha, V. (2024). Parenteral Estradiol for Transgender Women: Time to adjust the dose. <em>Endocrine Practice</em>, <em>30</em>(9), 893–894. [DOI:<a href="https://doi.org/10.1016/j.eprac.2024.07.005">10.1016/j.eprac.2024.07.005</a>]</li>
</ul>
<h3 id="update-5-kariyawasam-et-al-2024">Update 5: Kariyawasam et al. (2024)</h3>